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CRISPR-resistant viruses build ‘safe rooms’ to shield genomes from DNA-dicing enzymes

Bacteria and the viruses that infect them are engaged in a molecular arms race as ancient as life itself. Evolution has equipped bacteria with an arsenal of immune enzymes, including CRISPR-Cas systems, that target and destroy viral DNA. But bacteria-killing viruses, also known as phages, have devised their own tools to help them outmaneuver even the most formidable of these bacterial defenses.

Now, scientists at UC San Francisco and UC San Diego have discovered a remarkable new strategy that some phages employ to avoid becoming the next casualty of these DNA-dicing enzymes: after they infect , these phages construct an impenetrable “safe room” inside of their host, which protects vulnerable phage DNA from antiviral enzymes. This compartment, which resembles a , is the most effective CRISPR shield ever discovered in viruses.

“In our experiments, these phages didn’t succumb to any of the DNA-targeting CRISPR systems they were challenged with. This is the first time that anyone has found phages that exhibit this level of pan-CRISPR resistance,” said Joseph Bondy-Denomy, Ph.D., assistant professor in the Department of Microbiology and Immunology at UCSF. Bondy-Denomy led the research team that made the discovery, which is detailed in a paper published Dec. 9, 2019 in the journal Nature.

New laser technique images quantum world in a trillionth of a second

For the first time, researchers have been able to record, frame-by-frame, how an electron interacts with certain atomic vibrations in a solid. The technique captures a process that commonly causes electrical resistance in materials while, in others, can cause the exact opposite—the absence of resistance, or superconductivity.

“The way electrons interact with each other and their microscopic environment determines the properties of all solids,” said MengXing Na, a University of British Columbia (UBC) Ph.D. student and co-lead author of the study, published last week in Science. “Once we identify the dominant microscopic interactions that define a material’s properties, we can find ways to ‘turn up’ or ‘down’ the interaction to elicit useful electronic properties.”

Controlling these interactions is important for the technological exploitation of quantum materials, including superconductors, which are used in MRI machines, high-speed magnetic levitation trains, and could one day revolutionize how energy is transported.

After Transplant Procedure, Man’s Semen Contains Only Donor’s DNA

Chris Long is an IT worker in the Washoe County Sheriff’s Department in Reno, Nevada. But all the DNA in his semen belongs to a German man he’s never met.

That’s because Long received a bone marrow transplant from the European stranger four years ago — and the unexpected impact it has had on his biology could affect the future of forensic science.

According to a newly published New York Times story, the purpose of the transplant was to treat Long’s acute myeloid leukemia, a type of cancer that prevents the body from producing blood normally.

Our Bodies Age in Three Distinct Shifts, According to More Than 4,000 Blood Tests

In terms of biological ageing, the body seems to shift gears three times during our lifespans, new research suggests – with 34 years, 60 years and 78 years the key thresholds.

In other words, we now have evidence that ageing isn’t one long, continuous process that moves at the same speed throughout our lives.

The findings might help us understand more about how our bodies start to break down as we get older, and how specific age-related diseases – including Alzheimer’s or cardiovascular disease – could be better tackled.

The Singularity with Michio Kaku and Ray Kurzweil

Recently world-renowned theoretical physicist, Doctor Michio Kaku, sat down for an interview with world-renowned artificial intelligence Doctor Ray Kurzweil, to talk about The Singularity; who is at the forefront of artificial intelligence and robotics.

The two geniuses talked about how soon computer intelligence will soon surpass us and the possible outcomes of this.

Indian-origin scientist finds dead probiotic that can fix leaky gut

A team led by an Indian-origin scientist, Hariom Yadav, has identified a dead probiotic that can reduce age-related leaky gut and control harmful, ageing-related inflammation. Leaky gut, in which microbes and bacteria in the gut leak into the blood stream, causes an increase in low-grade inflammation, and these conditions are common in older people.

A Step Closer to a Bioengineered Liver Fit for Transplantation

Currently over 6,300 people in the UK are waiting for an organ transplant, and sadly everyday around three people die waiting. In efforts to reduce the reliance on organ donors and improve the outlook for patients, alternative sources of organs are being explored by several research groups.

In a study recently published in Nature Biomedical Engineering, bioengineered livers created by decellularization and recellularization were implanted into pigs, where they were able to sustain continuous perfusion for up to 15 days. We spoke to Miromatrix’s CEO, Dr Jeff Ross, to learn more about the study and how it advances the state of bioengineering organs.

Anna MacDonald (AM): What are some of the main challenges faced when creating bioengineered organs?