Lifeboat Foundation

Scientists simulate evolution in the lab by introducing mutations iteratively into biomolecules such as nucleic acids and selecting for desired properties. When carrying this process out specifically on RNA molecules, they can evolve the RNAs to bind specific small molecules. But many of these so-called aptamers don’t bind well to their targets when put inside cells because they don’t fold into stable structures.

“As we solved the structures of naturally occurring aptamers, we noticed they had much more complex secondary and tertiary structures” than versions made in the lab, says Robert T. Batey of the University of Colorado, Boulder. “So we decided to use these naturally occurring RNA folds as starting points” for producing more stable artificial aptamers.

To prove their concept, Batey and coworkers used RNA sequences from naturally occurring ribozymes and riboswitches as scaffolds to evolve aptamers that bind amino acids and other small molecules used to make neurotransmitters (Nat. Chem. Biol. 2017, DOI: 10.1038/nchembio.2278). The resulting aptamers are selective for these precursor molecules over structurally similar amino acids and the neurotransmitters themselves.

After making significant progress in understanding algae genetics, growth characteristics and increasing oil production, Synthetic Genomics, Inc. and ExxonMobil said they would extended their joint research agreement into advanced algae biofuels.

The two companies have been researching and developing oil from algae for use as a renewable, lower-emission alternative to traditional transportation fuels since 2009. They are seeking to develop strains of algae that demonstrate significantly improved photosynthetic efficiency and oil production through selection and genetic engineering of higher-performance algae strains.

My dream is coming true — Biocomputing with QC technology.

University of Maryland exploits redox molecules in E. coli to instruct the bacteria to swim or fluoresce based on electronic stimuli.

Syn. Neurons via Q-Dot Laser. Nice.

Greek researchers working at the National and Kapodistrian University of Athens (EKPA) optical communication photonic technology laboratory have developed an artificial “neuron” that simulates fundamental functions of the human brain, at speeds that are many orders of magnitude higher.

A paper on the new breakthrough made by the Greek team, led by Prof. Dimitris Syvridis with Dr. Charis Mesaritakis as main researcher and with Alexandros Kapsalis and Adonis Bogris listed as authors, was published in the “Scientific Reports” section of the science journal “Nature” on December 19.

Continue reading “Greek scientists create artificial neuron with quantum-dot lasers” »

And, one of the world’s greatest mysteries has solved!

Don’t feel too guilty when you drunkenly bite into a hot dog at 3 am – you can’t argue with biology.

Researchers at MIT’s Computer Science and Artificial Intelligence Laboratory have developed a new computational model of a neural circuit in the brain, which could shed light on the biological role of inhibitory neurons — neurons that keep other neurons from firing.

The model describes a neural circuit consisting of an array of input neurons and an equivalent number of output neurons. The circuit performs what neuroscientists call a “winner-take-all” operation, in which signals from multiple input neurons induce a signal in just one output neuron.

Using the tools of theoretical computer science, the researchers prove that, within the context of their model, a certain configuration of inhibitory neurons provides the most efficient means of enacting a winner-take-all operation. Because the model makes empirical predictions about the behavior of inhibitory neurons in the brain, it offers a good example of the way in which computational analysis could aid neuroscience.

Scientists identify the physical connection through which the prefrontal cortex inhibits instinctive behavior

From fighting the urge to hit someone to resisting the temptation to run off stage instead of giving that public speech, we are often confronted with situations where we have to curb our instincts. Scientists at the European Molecular Biology Laboratory (EMBL) have traced exactly which neuronal projections prevent social animals like us from acting out such impulses. The study, published in Nature Neuroscience, could have implications for schizophrenia and mood disorders like depression.

Continue reading “Neural connection keeps instincts in check” »

What happens when you have Deep Learning begin to generate your designs? The commons misconception would be that a machine’s design would look ‘mechanical’ or ‘logical’. However, what we seem to be finding is that they look very organic, in fact they look organic or like an alien biology. Take a look at some of these fascinating designs.

The photo above design is described as follows:

“This is not only an exciting development for the construction sector, but many other industries as well. In the case of this particular piece, the height is approximately half that of one designed for traditional production methods, while the direct weight reduction per node is 75%. On a construction project that means we could be looking at an overall weight reduction of the total structure of more than 40%. But the really exciting part is that this technique can potentially be applied to any industry that uses complex, high quality, metal products.”

Continue reading “The Alien Style of Deep Learning Generative Design” »

In Brief

• Peter Diamandis, founder and chairman of the XPRIZE Foundation, thinks the human species is headed for an evolutionary transformation.
• The evolution of life has slowly unfolded over 3.5 billion years; but its pace has rapidly increased in recent years. Diamandis believes this heralds the next, exciting stages of human evolution.

In the next 30 years, humanity is in for a transformation the likes of which we’ve never seen before—and XPRIZE Foundation founder and chairman Peter Diamandis believes that this will give birth to a new species. Diamandis admits that this might sound too far out there for most people. He is convinced, however, that we are evolving towards what he calls “meta-intelligence,” and today’s exponential rate of growth is one clear indication.

In an essay for Singularity Hub, Diamandis outlines the transformative stages in the multi-billion year pageant of evolution, and takes note of what the recent increasing “temperature” of evolution—a consequence of human activity—may mean for the future. The story, in a nutshell, is this—early prokaryotic life appears about 3.5 billion years ago (bya), representing perhaps a symbiosis of separate metabolic and replicative mechanisms of “life;” at 2.5 bya, eukaryotes emerge as composite organisms incorporating biological “technology” (other living things) within themselves; at 1.5 bya, multicellular metazoans appear as eukaryotes are yoked together in cooperative colonies; and at 400 million years ago, vertebrate fish species emerge onto land to begin life’s adventure beyond the seas.

Continue reading “Peter Diamandis Thinks We’re Evolving Toward ‘Meta-Intelligence’” »